Flushed and bled the brakes.
Topped off the coolant and bled the system.
Charged the battery.

Finally figured out why Ororo felt wrong: the latch for the seat lock came off. Bike literally feels wrong because the seat isn't securely latched and is sliding around while riding. Found the latch assembly and a mystery spring in the trunk. Problem is the bolt that held it is long gone.

Anyone know what size bolt that is and where the spring came from?

 

Is it # 12 in the seat fiche:

Honda Powersports' 2004 Honda Street Bike CBR600F4 Parts List

If so, 6x12mm.

If not, take a picture of where the bolt goes and I'll check mine for you and see if I can match it up for the correct size.